This project is designed to identify the general principles governing the adaptive response of individual microbes to environmental perturbations within a community context. It seeks to establish the contribution of rapid, post-transcriptional regulatory processes in the overall adaptive response of communities to environmental stress and determine how responses of individual members contribute to community metabolic homeostasis.
SEEK ID: https://emsl-seek.pnnl.gov/projects/4
Public web page: http://www.pnnl.gov/biology/programs/fsfa/research.stm
Organisms: Algoriphagus, Bacteroidetes, Halomonas, Idiomarina, Marinobacter, Oceanicaulis, Oceanicola, Phormidium, Porphyrobacter, Rhizobiales, Rhodobaca, Rhodobacteraceae
rc-support@pnnl.gov PALs: No PALs for this Project
Project created: 16th Dec 2014
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- People (39)
- Institutions (3)
- Investigations (1+5)
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- Data files (1+18)
- Publications (25)
- Presentations (0+7)
- Events (1+3)
Projects: Energy and Material Processing, Microbial Community Dynamics, Adaptive Responses
Institutions: Pacific Northwest National Laboratory
Projects: Energy and Material Processing, Microbial Community Dynamics, Adaptive Responses
Institutions: Pacific Northwest National Laboratory
Projects: Energy and Material Processing, Microbial Community Dynamics, Adaptive Responses
Institutions: Pacific Northwest National Laboratory
Expertise: Bioinformatics, Data Management, Genomics, visualization
Tools: Python, High-throughput sequencing, Qiime, USEARCH, R
Projects: Energy and Material Processing, Microbial Community Dynamics, Adaptive Responses
Institutions: Pacific Northwest National Laboratory
This investigation is designed to understand the processes and mechanisms involved in the succession of microbial communities isolated fro Hot Lake. Succession is both a natural seasonal process as well as a response to disturbance. We want to understand the general principles that are involved in this process, specifically which species drive the succession process and what roles the individual species play both early and late in succession. The influence of nutrition and environmental factors ...
Snapshots: No snapshots
Collection of scanning electron microscope images of Ana and Oscar UCCs taken in May of 2012. Shows the cyanobacteria structure and multiple associated heterotrophs.
Creator: Alice Dohnalkova
Submitter: Steven Wiley
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Abstract (Expand)
Authors: J. J. Moran, L. M. Whitmore, N. G. Isern, M. F. Romine, K. M. Riha, W. P. Inskeep, H. W. Kreuzer
Date Published: 19th Mar 2016
Publication Type: Not specified
PubMed ID: 26995682
Citation: Extremophiles. 2016 Mar 19.
Abstract (Expand)
Authors: L. N. Anderson, P. K. Koech, A. E. Plymale, E. V. Landorf, A. Konopka, F. R. Collart, M. S. Lipton, M. F. Romine, A. T. Wright
Date Published: 22nd Dec 2015
Publication Type: Not specified
PubMed ID: 26669591
Citation: ACS Chem Biol. 2016 Feb 19;11(2):345-54. doi: 10.1021/acschembio.5b00918. Epub 2015 Dec 22.
Abstract (Expand)
Authors: Hans Bernstein, M. A. Charania, R. S. McClure, N. C. Sadler, M. R. Melnicki, E. A. Hill, L. M. Markillie, C. D. Nicora, A. T. Wright, M. F. Romine, A. S. Beliaev
Date Published: 4th Nov 2015
Publication Type: Not specified
PubMed ID: 26525576
Citation: Sci Rep. 2015 Nov 3;5:16004. doi: 10.1038/srep16004.
Abstract (Expand)
Authors: W. C. Nelson, Y. Maezato, Y. W. Wu, M. F. Romine, S. R. Lindemann
Date Published: 23rd Oct 2015
Publication Type: Not specified
PubMed ID: 26497460
Citation: Appl Environ Microbiol. 2015 Oct 23;82(1):255-67. doi: 10.1128/AEM.02274-15.
Abstract (Expand)
Authors: J. P. Beam, Z. J. Jay, M. C. Schmid, D. B. Rusch, M. F. Romine, M. Jennings Rde, M. A. Kozubal, S. G. Tringe, M. Wagner, W. P. Inskeep
Date Published: 3rd Jul 2015
Publication Type: Not specified
PubMed ID: 26140529
Citation: ISME J. 2016 Jan;10(1):210-24. doi: 10.1038/ismej.2015.83. Epub 2015 Jul 3.
The META Center for Systems Biology will host its second annual symposium in Eugene, Oregon on July 31-August 2, 2015. The Symposium on Host-Microbe Systems Biology will focus on the theme of “Synthesis and Selection of Host-Microbe Systems”. We will explore the properties of host-microbe systems from efforts to build these systems de novo, using approaches of synthetic biology, and to subject these systems to selective pressures, using approaches of experimental evolution. More details about the ...
Start Date: 31st Jul 2015
End Date: 2nd Aug 2015
Event Website: http://meta.uoregon.edu/symposium-2015/
Country: United States
City: Eugene, Oregon